Dear Office, my user is firstname.lastname@example.org
I uploaded library files in Galaxy (fastq.gz files). After that I performed FASTQ Groomer, Trimmomatic, Bowtie2, Filter SAM or BAM, output SAM or BAM, MACS and intersect analysis.
At first I performed nice analysis. However, these last two days the online software is not working and I have bowtie analysis still running. Are there problems?
After that I have a technical question: My samples have been read by Illumina platform 12 million times. Now I would like to compare results obtained from these reads to other obtained from half reads. Which is the tool or application by which I could perform my analysis in 6 million of reads?
Thank you very much Happy Easter
Dr. Francesco Piacenza