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• Aachange And Sift Tools
  Hello, I have some sequencing results I want to blast in order to identify what are known SNPs a...
• installation of perl modules from toolshed
  Hello, I am writing custom tool for Galaxy that uses perl scripts. These perl scripts use specif...
• Variation in alternative splicing across plant tissues
  Dear all, I am trying to identify AS events from different tissues (5 tissues). and I did that u...
• Is it possible to add custom JavaScript tool in Galaxy
  I'm looking into adding a custom tool into Galaxy that makes a HTTP request to an API end point, ...
• metagenome analysis in Galaxy
  Dear ;   I am a biologist and new to Galaxy.  I have close to 200 paired-end Illumina 16S rRNA...
• Copy Number Variation Detcetion In Glaxay
  Is there any tool/ combination of tools with in galaxy which can detect CNV. I have 100X paired s...
• How To Add A Tool To Cloud Galaxy
  Hi Folks, I could use some help on adding a tool to the cloud version of Galaxy. The Cloud start...
• Galaxy 101 Tutorial UCSC Browser version
  Hi there, Not sure which version of UCSC Genome Browser was used for the Galaxy 101 Tutorial. I ...
• I've written a tool in C and want to put it on the galaxy toolshed, but don't understand how to make it compile on other's machines
  As the title says, I think I have all the correct files for my tool (including the XML file to ru...
• Are there Structural Variant Analysis Software in Galaxy?
  Hello Galaxy, Do you know which software available on Galaxy is capable of performing structural...
• Homer getDiffExpression.pl edgeR
  To complement out cuffdiff analysis we thought to take a parallel route using Homer. to do so we...
• How to identify sequence motifs in bed file
  If I have a bed file of regions surrounding the TSS of several genes, how do I identify which reg...
• Configuring Galaxy Server
  Hi All, Thank you for last reply and links about galaxy structure. The links were helpful. But s...
• Can I Call Snps And Indels In Galaxy
  I have  two  DNA seq files for hg18 and want identify SNPs in each file as compare dto existing d...