Question: FASTQ groomer - problem with dataset?
3.2 years ago by
ltosti88 • 0
ltosti88 • 0 wrote:
I started running the FASTQ groomer tool on about 10 datasets in parallel, 2 days ago.
All of the jobs ran fine in about half an hour except one that is still running. Is this normal or is there a problem with this specific file?
Thanks for your help!
ADD COMMENT • link •modified 3.2 years ago by Jennifer Hillman Jackson ♦ 25k • written 3.2 years ago by ltosti88 • 0
Are you at https://usegalaxy.org?
If so that is unusually long. How big is the fastq file?
Yes, I'm on usegalaxy.org; the file is pretty big actually (3Gb) but the other nine ones were just a bit smaller...it sounds weird to me as well, but what should I do?