Question: Using a genome that isn't on the Galaxy server (Custom Reference Genome)
gravatar for sarah.l.tulin
3.3 years ago by
sarah.l.tulin0 wrote:


I want to run the MACS program on my mapped reads from the Galaxy server to do peak calling. However, Galaxy doesn't have the genome I mapped my reads to on the server. Is there a way to add/ upload a genome or do I have to put in a request? The genome I used is S. purpuratus v 3.1



ADD COMMENTlink modified 3.3 years ago by Jennifer Hillman Jackson25k • written 3.3 years ago by sarah.l.tulin0
gravatar for Jennifer Hillman Jackson
3.3 years ago by
United States
Jennifer Hillman Jackson25k wrote:


Please see section 2.13 of the Galaxy support wiki for how to use a Custom Reference Genome (including the creation of a Custom Build).

Best, Jen, Galaxy team

ADD COMMENTlink written 3.3 years ago by Jennifer Hillman Jackson25k
Please log in to add an answer.


Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 16.09
Traffic: 181 users visited in the last hour