Question: IGV reads visualization without reference genome in fasta format
gravatar for ceityk
3.4 years ago by
Iran, Islamic Republic Of
ceityk10 wrote:


I have a pre-build index for S.cervisiae and aligned some reads to it using bowtie (then is used samtools for other parts)

I do not have the reference genome in .fasta format.

how can i visualize the aligned reads using IGV in this condition?


thanks in advance.


igv • 919 views
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