Question: IGV reads visualization without reference genome in fasta format
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gravatar for ceityk
3.0 years ago by
ceityk10
Iran, Islamic Republic Of
ceityk10 wrote:

hi,

I have a pre-build index for S.cervisiae and aligned some reads to it using bowtie (then is used samtools for other parts)

I do not have the reference genome in .fasta format.

how can i visualize the aligned reads using IGV in this condition?

 

thanks in advance.

 

igv • 817 views
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