Question: list collection output - format set from input
0
vowinkel.alexander • 10 wrote:
I have an input, that can be fasta,fastqsanger,fastqillumina:
<param name="fastq_input1" type="data" format="fasta,fastqsanger,fastqillumina" label="Select the fastq file" help="Specify fastq file with reads"/>
I have multiple outputfiles - bundled in a list collection:
<collection name="split_output" type="list" label="@OUTPUT_NAME_PREFIX@ on ${on_string} (Fastq Collection)" format_source="fastq_input1">
<discover_datasets pattern="__name_and_ext__" directory="splits" />
</collection>
The format_source parameter doesn't work - the files in the list (extension fq) are of format "fq".
How can I make it possible that they are fasta,fastqsanger,fastqillumina depending on fastq_input1?