Question: Post Operational Attribute File Analysis And Attribute Management
0
Dennis Gascoigne • 30 wrote:
We are working with some very large sequence libraries (paired end 70M
reads+ each end - 15Gbx2). We already know what the file types are and
that
they are appropriate for the pipeline. There seems to be a large
amount of
the processing effort expended after the completion after each step in
the
workflow analysing the files and determining their attributes - this
is
related to the size of the files (which are large at every step) and
is of
no practical use to us, except maybe on the final step.
Is there any way to suppress post processing steps and simply accept
the
file as specified in the tool output tags? If not would there be any
unexpected implications if we revise the scripts and remove any of
these
steps? Which scripts should we focus on?
Cheers
Dennis