Question: Align Many Fasta Files
gravatar for Jennifer Hillman Jackson
4.7 years ago by
United States
Jennifer Hillman Jackson25k wrote:
Hi Kristen, Are these longer RNA sequences, such as transcripts? Then a tool like BLAT (or BLAST) would be a good choice. Both are wrapped for Galaxy and available in the Tool Shed for use with a local, cloud, or slipstream Galaxy. A cloud is probably the simplest choice for many users - and if the work is for research purposes, be sure to check out Amazon's grant program. The public Main server at has mappers, but these are tuned for NGS reads. Other public Galaxy servers can offer mapping services, too. There are 50+ to review and what each offers changes over time. If you want to look, here is the list: Keeping questions on the mailing lists helps us with tracking and is appreciated! Thanks, Jen Galaxy team -- Jennifer Hillman-Jackson
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ADD COMMENTlink written 4.7 years ago by Jennifer Hillman Jackson25k
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