Question: Same Rnaseq Samples Give Different Fpkm Values When Run Against Different Samples
0
Elwood Linney • 180 wrote:
Hello,
I am sure this has come up before and maybe I missed the answer.
If in using cuffdiff I run a sample 1(3 repeats) vs a sample 2 and
then
run the same sample 1(3 repeats) against a sample 3 or a sample 4, I
get
different value for fpkm from sample 1 each time.
Is there something going wrong here or is there something in the
program
that causes this difference?
I have seen this with online Galaxy and with the instance I have on my
Mac
Pro
el linney
Duke University
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modified 4.8 years ago
by
Jennifer Hillman Jackson ♦ 25k
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written
4.8 years ago by
Elwood Linney • 180
