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Question: Bisulfite Seq
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gravatar for Mathew Bunj
4.8 years ago by
Mathew Bunj • 100
Mathew Bunj • 100 wrote:
Do we have any tool which can be used for analyzing and QC check for bisulfite sequencing. I have FASTq files. Thanks Mathew
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modified 4.8 years ago by Bjoern Gruening ♦ 5.1k • written 4.8 years ago by Mathew Bunj • 100
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gravatar for Bjoern Gruening
4.8 years ago by
Bjoern Gruening ♦ 5.1k
Germany
Bjoern Gruening ♦ 5.1k wrote:
Hi Mathew, I have a mapper (bismark) and my own tools (+wrapper) and was able to do an entire analysis with it. The bismark wrapper is in the toolshed. The other tools can be found in my github repository. https://github.com/bgruening galaxytools and methtools Hope that helps, Bjoern
ADD COMMENT • link written 4.8 years ago by Bjoern Gruening ♦ 5.1k
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