Question: Combining Two Fastq Files
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gravatar for shamsher jagat
5.6 years ago by
United States
shamsher jagat590 wrote:
Is there an option in galaxy to combine two fastq files? Thanks kanwar
galaxy • 2.1k views
ADD COMMENTlink modified 5.6 years ago by Jennifer Hillman Jackson25k • written 5.6 years ago by shamsher jagat590
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gravatar for Jennifer Hillman Jackson
5.6 years ago by
United States
Jennifer Hillman Jackson25k wrote:
Hello Kanwar, If you just need to combine two datasets end to end, the tool "Text Manipulation -> Concatenate datasets tail-to-head" is a good choice. Please let us know if you had something else in mind, Jen Galaxy team -- Jennifer Jackson http://galaxyproject.org
ADD COMMENTlink written 5.6 years ago by Jennifer Hillman Jackson25k
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gravatar for Peter Cock
5.6 years ago by
Peter Cock1.4k
European Union
Peter Cock1.4k wrote:
Yes, but what do you mean by combine? Interleave? Concatenate? Peter
ADD COMMENTlink written 5.6 years ago by Peter Cock1.4k
This is my question, too! In my case, I just want to combine two fastq files into only one, for instance, one file come first and then comes the second. How can I make it? Thanks! Zhiqiang Quoting "Peter Cock" <p.j.a.cock@googlemail.com>: Zhiqiang Shu/Deng Lab Department of Biological Science Florida State University 319 Stadium Dr. Tallahassee, FL, USA, 32306-4295 zshu@bio.fsu.edu
ADD REPLYlink written 5.6 years ago by Zhiqiang Shu80
Hi Zhiqiang, Here are the instructions, in case you didn't see the other post: http://lists.bx.psu.edu/pipermail/galaxy- user/2012-November/005576.html Thanks! Jen Galaxy team -- Jennifer Jackson http://galaxyproject.org
ADD REPLYlink written 5.6 years ago by Jennifer Hillman Jackson25k
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