Question: Temporary Files
0
Christopher Schroeder • 20 wrote:
Dear all,
we extended the galaxy functionality with a couple of smaller custom
scripts. Now we are in the need of some tmpFiles, since our data is
getting bigger. As far as I understand galaxy by now there might be
several options:
- job_working_directory (all "normal" files generated by the job,
deleted upon completion of job - safe?)
- tmp-folder within the database folder (custom path in
universe_wsgi.ini?)
- system-tmp-folder (e.g. samtools-wraper -> only very limited space
on
this harddisk)
What is the best way to store temporary data in Galaxy (that can be
deleted after job completion)?
Thank you in advance for your help!
Chris
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modified 7.4 years ago
by
Nate Coraor ♦ 3.2k
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written
7.4 years ago by
Christopher Schroeder • 20
