Question: How to use Mothur Unique.seqs
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gravatar for zhengg
7 months ago by
zhengg0
zhengg0 wrote:

I see two window 1. Sequences to filter I use this to select sequence(s) of new assembling 2. name file or count table - Sequences Names What is this for? And where to input the reference sequence?

Thank you! A Galaxy User

mothur unique.seqs usage galaxy • 289 views
ADD COMMENTlink modified 7 months ago by Jennifer Hillman Jackson25k • written 7 months ago by zhengg0
0
gravatar for Jennifer Hillman Jackson
7 months ago by
United States
Jennifer Hillman Jackson25k wrote:

Hello,

Please see this Galaxy Training Network (GTN) tutorial for help using Unique.seqs in combination with the other Mothur tools: https://galaxyproject.github.io/training-material/topics/metagenomics/tutorials/mothur-miseq-sop/tutorial.html

The tool requires a fasta input and the name/count input is optional. Please see the tool form for the exact outputs produced. This includes a new "names" output for downstream use (as needed) - or just run the tool on your fasta dataset and review.

All Galaxy tutorials: https://galaxyproject.org/learn/

Thanks! Jen, Galaxy team

ADD COMMENTlink modified 7 months ago • written 7 months ago by Jennifer Hillman Jackson25k
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