Question: Free Bayes Exit code error
0
gravatar for federico.bernuzzi
11 weeks ago by
Quadram Institute of BioSciences
federico.bernuzzi20 wrote:

Hi guys

Has anyone come across this error?

Fatal error: Exit code 25 () unable to find FASTA index entry for '10' unable to find FASTA index entry for '1' unable to find FASTA index entry for '11' unable to find FASTA index entry for '12' unable to find FASTA index entry for '13' unable to find FASTA index entry for '14' unable to find FASTA index entry for '15' unable to find FASTA index entry for '16' unable to find FASTA index entry for '17' unable to find FASTA index entry for '18' unable to find FASTA index entry for '19' unable to find FASTA index entry for '20' unable to find FASTA index entry for '2' unable to find FASTA index entry for '21' unable to find FASTA index entry for '22' unable to find FASTA index entry for '3' unable to find FASTA index entry for '4' unable to find FASTA index entry for '5' unable to find FASTA index entry for '6' unable to find FASTA index entry for '7' unable to find FASTA index entry for '8' unable to find FASTA index entry for '9' unable to find FASTA index entry for 'MT' unable to find FASTA index entry for 'X' unable to find FASTA index entry for 'Y'

Thanks for the advice. Much appreciated

ADD COMMENTlink modified 11 weeks ago by Jennifer Hillman Jackson23k • written 11 weeks ago by federico.bernuzzi20
0
gravatar for Jennifer Hillman Jackson
11 weeks ago by
United States
Jennifer Hillman Jackson23k wrote:

Hello -

These are warnings from the tool indicating a genome mismatch problem. This wouldn't necessarily be the root cause (or only cause) of why the job ended in an error though. It depends not only on the tool but the settings. But if a genome mismatch problem is present, even if a job is technically "successful" (green in the history) - the results will not be valid.

First, correct the genome mismatch between the inputs, this is how: Mismatched Chromosome identifiers

Then rerun and see what type of error you get (if any). It can be posted back here (click on the bug icon to view/copy) or sent in as a bug report if working at https://usegalaxy.org.

Hope this helps!

Jen, Galaxy team

All Support FAQs

ADD COMMENTlink written 11 weeks ago by Jennifer Hillman Jackson23k

Thanks Jen, much appreciated

ADD REPLYlink written 11 weeks ago by federico.bernuzzi20
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 16.09
Traffic: 100 users visited in the last hour