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• Is the main Galaxy server at https://usegalaxy.org down? [NOW is Back up!!]
  I keep getting a "Server non-responsive" message. Is the main galaxy server down, or is this on ...
• problem with Profile Annotaions
  The Profile Annotation tools requires that a parameter be chosen for "Choose Tables to Use" but t...
• where is locally cached sequence/ alignment data in Galaxy?
  Hi, Does anyone know how to access the locally cached alignment files (MAF)? On the website: Unde...
• Gene annotation dataset from Ensembl not recognized by Cufflinks
  Hello Galaxy/Biostars, I am trying to perform RNA-seq analysis using Cufflinks at Galaxy. In ord...
• FastQC on Main Galaxy broken
  When I try and do FastQC on fastqsanger files at usegalaxy.org, I get: Fatal error: Exit code 1 ...
• Reference genome absent
  Dear Biostar, For mapping our paired end reads against horse, we are unable to find a reference ...
• Galaxy Down
  Dear Galaxy Team! When will Galaxy approximately be up again? Thx, Felix
• How to specify output format by a drop-down box?
  Hi. How to let the user select from a drop-down box for the desired output format (formatA or for...
• Galaxy Down?
  Hi, is there currently a problem with the Galaxy Server? When will it be up again? thx, Felix
• Main Galaxy Instance down for days?
  Hi, It seems the Main Galaxy Instance has been down since last week - is there any news about whe...
• Planemo tool_init input options
  Hi, Is it possible to add labels and "type in" (number/txt) or "pull down menu" input using plane...
• Annotation File For Cufflinks
  Hi jen and galaxy users, when I try to use cufflinks in GALAXY and select "use reference annotati...