Question: Oxford Nanopore Technologies: Base-Called FAST5 Datasets
gravatar for joseph
2.1 years ago by
joseph0 wrote:

Hello There.

Just a quick question when regarding Nanopore Sequencing. Any type of assistance is appreciated!

As I understand - preceding a 48-hour, or 72-hour sequencing protocol, read event data is base-called by the software Metrichor via Cloud. Would there be datasets - available on the web - that are of type FAST5 format which are not base-called? The goal is to run the read-event data through an off-line, open source base-caller.

Thank You. - JS

nanopore-seq hdf5 minion • 736 views
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