Question: "Maximun information quality filtering" trimming step in Trimmomatic
gravatar for Carlos Andrés Caicedo
2.2 years ago by

Why is not present the Trimmomatic operation MAXINFO at the Galaxy instance of Trimmomatic?

The "Maximun information quality filtering" (MAXINFO) performs an adaptive quality trim, balancing the benefits of retaining longer reads against the costs of retaining bases with errors.

The information about this trimming step can be found at:



ADD COMMENTlink modified 2.2 years ago by Jennifer Hillman Jackson25k • written 2.2 years ago by Carlos Andrés Caicedo0
gravatar for Jennifer Hillman Jackson
2.2 years ago by
United States
Jennifer Hillman Jackson25k wrote:


This is how the tool authors implemented the wrapper. If you want to know why - or if they are planning on changes - contact them directly through the Tool Shed.

Log in, navigate to the tool, and in the upper right corner pull down menu is the option to send them an inquiry. Include a link to this post if you want them to reply here.

Thanks, Jen, Galaxy team

ADD COMMENTlink written 2.2 years ago by Jennifer Hillman Jackson25k
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