I have a tool that creates a deterministic amount of output files based on the choice of input parameters. The tool outputs a varied number of compressed (gzip) fastq files. When the tool completes, the output files are created, but I am unable to load the data into my history pane. The output files are written in the format output.fastq.gz.
I used the code from the galaxy central repository to try and discover the output
<data name="output" format="fastq" > <discover_datasets pattern="(?P<designation>.+)\.fastq\.gz" ext="toolshed.gz" visible="true" assign_primary_output="true" /> </data>
I've tried numerous other approaches and parameters, but have not had any success. I'm not completely sure that the toolshed.gz extension is correct, but that was the closest equivalent to gzip I could find in the available datatypes section of the datatypes_conf.xml.sample file. Any advice?