User: gskbioinfo143

Reputation:
0
Status:
New User
Location:
Last seen:
1 year, 5 months ago
Joined:
1 year, 10 months ago
Email:
g************@gmail.com

Posts by gskbioinfo143

<prev • 8 results • page 1 of 1 • next >
0
votes
0
answers
435
views
0
answers
MACS shows error for MEDIP Seq Data
... Dear sir, I tried to do peak calling for Medipseq Data using MACS. i have done mapping using Bowtie2 for Treatment files (Paired End). and Normal Control files (paired end). then gave these files as input for MACS and MACS2 but even if mfold values i changed the Analysis fails. Need help Thanks ...
macs medipseq written 18 months ago by gskbioinfo1430
0
votes
1
answer
544
views
1
answers
Comment: C: SICER error: SICER is not available for the genome
... hi i tried to analyze two datasets SRX681547 and SRX681548 keeping one as treatment and other as control to find unique enriched regions or peaks using SICER tool but analysis fails(hg19 database). Need help please the analysis is at shashikanth20@gmail.com account ...
written 21 months ago by gskbioinfo1430
0
votes
1
answer
544
views
1
answer
SICER error: SICER is not available for the genome
... Hi im getting error while using SICER on data sets SRX681547 and SRX681548 it shows **SICER is not available for the genome** . i checked this web https://wiki.galaxyproject.org/Support#Tool_doesn.27t_recognize_dataset and edited the genome Hg38 to all data but still the error shows the same. ple ...
database genome sicer enhancement written 21 months ago by gskbioinfo1430 • updated 21 months ago by Jennifer Hillman Jackson25k
0
votes
1
answer
472
views
1
answers
Comment: C: peaking calling in MACS shows error?
... Hi SICER tool in galaxy is not working it shows "SICER is not available for the genome" when i input treatment and control bed file and click execute. i have seen this post https://biostar.usegalaxy.org/p/18663/ but need help how to resolve this please Please need help Thank you ...
written 21 months ago by gskbioinfo1430
0
votes
1
answer
472
views
1
answers
Comment: C: peaking calling in MACS shows error?
... thanks i changed MFOLD settings its working ...
written 21 months ago by gskbioinfo1430
0
votes
1
answer
472
views
1
answers
Comment: C: peaking calling in MACS shows error?
... my Galaxy account with emailID: shashikanth20@gmail.com im doing in https://usegalaxy.org/ website it says Process is terminated for that dataset thanks ...
written 21 months ago by gskbioinfo1430
0
votes
1
answer
472
views
1
answers
Comment: C: peaking calling in MACS shows error?
... i cant get reasons for that error ...
written 21 months ago by gskbioinfo1430
2
votes
1
answer
472
views
1
answer
peaking calling in MACS shows error?
... Hi everyone im trying to do peak calling using MACS in Galaxy(default settings) for dataset SRX681547. but analysis was not successful it fails i tried again. can anyone help me with this Thank you ...
macs peakcalling written 21 months ago by gskbioinfo1430 • updated 21 months ago by Jennifer Hillman Jackson25k

Latest awards to gskbioinfo143

No awards yet. Soon to come :-)

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 16.09
Traffic: 134 users visited in the last hour