User: zhihengbai

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zhihengbai40
Reputation:
40
Status:
New User
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Last seen:
2 years, 1 month ago
Joined:
2 years, 3 months ago
Email:
z*********@gmail.com

Posts by zhihengbai

<prev • 11 results • page 1 of 2 • next >
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Comment: C: new user: where is the 'Admin Interface' in local galaxy?
... Did you log in? If you did, then the only advise I have is 'restart the computer' . Perhaps it will update some scripts and make things work ...
written 2.1 years ago by zhihengbai40
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Comment: C: problems with tools in local galaxy
... Sorry for the ambiguity. I mean use the free server through the link 'https://usegalaxy.org' rather than locally installing a galaxy. I log in to [https://usegalaxy.org][1] and 'geneban2gff' tool is not there, but this tool exists in [https://toolshed.g2.bx.psu.edu][2]. So, the question is 'Can I ...
written 2.3 years ago by zhihengbai40
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Comment: C: problems with tools in local galaxy
... Um...but the 'main tools shed' is supposed to be there by default,right? (I've done the 'set the directory for tool dependencies' and 'create and activate tool shed conf file' things) So the 'Search and Browse' link should have been there. Another question: for those tools not present in the web ve ...
written 2.3 years ago by zhihengbai40
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Comment: C: problems with tools in local galaxy
... Thanks for the reply. You are right there was no tool in the tools shed because tools installation was what I was trying to do. It seemed that opening the 'Download local tools' page is a step of installation... btw, I checked the 'Installing Tools into Galaxy from Tool Shed' page before I posted th ...
written 2.3 years ago by zhihengbai40
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problems with tools in local galaxy
... After clicking the 'Download local tool' button in the admin interface, a blank screen shown up. ![][1] So I checked the 'View Tool Error Logs'. ![][2] OK... now the system cannot find a file which is exactly there.(btw the 'home' in the 'files' window is the same path as '/home/visitors/bzh' in th ...
software error written 2.3 years ago by zhihengbai40 • updated 2.3 years ago by Martin Čech ♦♦ 4.9k
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Comment: C: new user: where is the 'Admin Interface' in local galaxy?
... Yeah, it's exactly the right spelling... Anyway, I am able to see the admin interface now after restarting the workstation(without change anything in the galaxy folder!), though I encounter some other problems now. Life is full of bugs! ...
written 2.3 years ago by zhihengbai40
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Comment: C: new user: where is the 'Admin Interface' in local galaxy?
... No, I did it in the same folder and there is only one 'galaxy.ini' file. After checking your comments, I download the whole galaxy again and install it in a totally different folder. Now I am able to change the brand or change the host address when run the server. Still, I don't see 'Admin' button. ...
written 2.3 years ago by zhihengbai40
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Comment: C: new user: where is the 'Admin Interface' in local galaxy?
... I guess that's the problem. Noting happened after I changed the 'brand'. The 'galaxy.ini' file did not exist right after installation. I just copied one 'galaxy.ini.sample' file in 'path to galaxy/config' folder, pasted it in the same folder, changed its file name to 'galaxy.ini' and then modified i ...
written 2.3 years ago by zhihengbai40
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Comment: C: new user: where is the 'Admin Interface' in local galaxy?
... Any other possible reason? Cause I am sure that I changed the ini file and saved the changes and restart the server. And it didn't work. ...
written 2.3 years ago by zhihengbai40
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Comment: C: new user: where is the 'Admin Interface' in local galaxy?
... sure. I did it several times ...
written 2.3 years ago by zhihengbai40

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