User: tony.schreiner

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Posts by tony.schreiner

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Answer: A: galaxy jobs with system-wide python
... Replying to myself here. Not exactly an answer to my question, but my issue was solved by adding import sys sys.path.append(...) sys.path.append(...) for a few of the relevant original sys.path entries for the un-virtualized python. ...
written 18 months ago by tony.schreiner20
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Comment: C: galaxy jobs with system-wide python
... I expect it could be done with a wrapper shell script, but I'm hoping for a more direct way. ...
written 18 months ago by tony.schreiner20
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galaxy jobs with system-wide python
... Is it possible to run galaxy jobs with the system python instead of the virtualenv'ed one that runs the server? I want to do that because of many packages available in the system python, that I don't want to install in the virtualenv; or for the time being, as tool dependencies. Also open to heari ...
python virtualenv written 18 months ago by tony.schreiner20 • updated 18 months ago by Rob50

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