User: dzz0008

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dzz00080
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d******@auburn.edu

Posts by dzz0008

<prev • 7 results • page 1 of 1 • next >
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Answer: A: Help unload genome (not listed currently)
... I just found this links. So we can upload the custom genome by ourself, right ? https://wiki.galaxyproject.org/Learn/CustomGenomes Dong ...
written 8 months ago by dzz00080
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Help unload genome (not listed currently)
... Hello, I just want to ask could your galaxy group help me upload the channel catfish genome (IpCoco_1.2; https://www.ncbi.nlm.nih.gov/assembly/GCF_001660625.1/)? Thanks very much. Dong ...
rna-seq written 8 months ago by dzz00080
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Comment: C: GTF/GFF file generation
... Thanks Jen. So if that organism does not have reference genome, we could not locate the GTF file? Dongdong ...
written 16 months ago by dzz00080
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GTF/GFF file generation
... Hi galaxy team, I want ask how can I generate the gene annotation GTF/ GFF files? My studied organism is Pompano fish, not the model organisms like Drosophila malanogaster that can be download directly from UCSC. But I really need the that file to do Gene-based read counting with HTseq-count. Th ...
rna-seq written 16 months ago by dzz00080 • updated 16 months ago by Jennifer Hillman Jackson23k
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Comment: C: How to release quota disk
... Thanks. I will try. Dongdong ...
written 16 months ago by dzz00080
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How to release quota disk
... Hi, I encountered this problem."You are over your disk quota. Tool execution is on hold until your disk usage drops below your allocated quota.“ How can I release my quota disk? Thanks! ...
rna-seq written 16 months ago by dzz00080 • updated 16 months ago by bryantl90
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Jobs in queue for so long time and seem interpreted
... Hi, I want to do the RNA-seq analysis but the uploading files are in queue for a day but normally they should be in few minutes. And the other processes of Groomer and Bowtie are all in queue. Do you know what is the problem? My data are too large? The quota disk is not enough? Could you help me fi ...
rna-seq written 17 months ago by dzz00080 • updated 17 months ago by Jennifer Hillman Jackson23k

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