User: Genosis

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Genosis20
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11 months, 4 weeks ago
Joined:
1 year, 7 months ago
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a***********@hotmail.com

Posts by Genosis

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Problem with running tophat2
... Hello everyone, this is the first time i'm trying to run tophat2 on a computer cluster, which already has tophat2 / cufflinks and GTF files pre-installed. I am pretty new to the UNIX environment so I apologise if this question seems too 'basic'. For my experiment: My fastq files are human, pair ...
rnaseq bowtie tophat rna-seq written 18 months ago by Genosis20 • updated 18 months ago by Jennifer Hillman Jackson23k
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Problem with running TopHat and MARKDuplicates on Galaxy
... To galaxy experts, I would like to ask your advice on some problems I've been encountering with running my dataset on Galaxy. I have a set of paired end reads from Illumina HisEq which I have uploaded and attempt to run a workflow *by TRAPLINE* and is currently stuck with a few error messages: 1. ...
error trapline galaxy tophat markduplicates written 19 months ago by Genosis20
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Galaxy workflow help - "This is a new dataset and not all of its data are available yet"
... Hi I would really like to hear your advice here. I am trying to run some RNAseq analysis using a workflow on galaxy. After FasQC, the workflow boxes remain grey with the following message: "This is a new dataset and not all of its data are available yet" I checked the hidden files but did not fi ...
galaxy written 19 months ago by Genosis20 • updated 19 months ago by Jennifer Hillman Jackson23k

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