User: up652214

gravatar for up652214
up6522140
Reputation:
0
Status:
New User
Location:
Last seen:
2 years, 1 month ago
Joined:
2 years, 2 months ago
Email:
u*******@myport.ac.uk

Posts by up652214

<prev • 4 results • page 1 of 1 • next >
0
votes
1
answer
490
views
1
answer
Alternative to Count Covariates + Table Recalibration for Base Recalibration
... Hi I recently found out that the above tool Count Covariates fails now on the Galaxy main due to being deprecated, I was wondering if anyone knows if an alternative exists to perform the same function within another suite? Many thanks, Louisa ...
gatk snp written 2.2 years ago by up6522140 • updated 2.2 years ago by Jennifer Hillman Jackson25k
0
votes
2
answers
613
views
2
answers
Comment: C: Count Covariates GATK error
... Sorry I meant to comment this here: Thanks I am using GATK at Galaxy Main. I was wondering if you knew of any alternative tools I could use for Base Recalibration instead of Count Covariates/Table Recalibration? Many thanks, Louisa ...
written 2.2 years ago by up6522140
0
votes
2
answers
613
views
2
answers
Answer: A: Count Covariates GATK error
... Hi, I am using GATK at Galaxy Main. I was wondering if you knew of any alternative tools I could use for Base Recalibration instead of Count Covariates/Table Recalibration? Many thanks, Louisa ...
written 2.2 years ago by up6522140
0
votes
2
answers
613
views
2
answers
Count Covariates GATK error
... Hi, I am trying to run a pipe-line for calling variants and have encountered this error while trying to use the tool Count Covariates: Picked up _JAVA_OPTIONS: -Djava.io.tmpdir=/galaxy-repl/main/scratch ##### ERROR ------------------------------------------------------------------------------------ ...
gatk snp written 2.2 years ago by up6522140

Latest awards to up652214

No awards yet. Soon to come :-)

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 16.09
Traffic: 120 users visited in the last hour