User: megana.prasad

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Posts by megana.prasad

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Varscan QUAL field
... Hi, I am running Varscan through the galaxy interface. Although the tool runs correctly and generates a VCF file, the QUAL field is empty, i.e., has "." for each variant. I get this output both when running Varscan on an mpileup file and on individual pileup files. I wasn't able to find any settin ...
varscan written 2.2 years ago by megana.prasad0

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