User: nvlinh.dth

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nvlinh.dth10
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Posts by nvlinh.dth

<prev • 3 results • page 1 of 1 • next >
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Comment: C: Bcf To Vcf
... Dear all, I am convertting bcf file to vcf file format. I use bcftools view at http://biominavm-galaxy.biomina.be/galaxy/, but out put converted is tabular format.Can you help me, please. And I have one more question, why dont't I acceess website usegalaxy.org, I am Vietnam. Thanks ...
written 20 months ago by nvlinh.dth10
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(Closed) BAM to VCF format
... I'm analyzing NGS data on website:usegalaxy.org in the following steps: 1. Fastq file Raw reads QC FASTQ Groomer FASTQ Trimmer Convert to Fastqsanger file Map to reference (Map with BWA for Illumina) Convert SAM file to BAM Mark to Duplicates (Picard tools) or make a VCF file. Analysis by GATK ...
galaxy written 2.5 years ago by nvlinh.dth10
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GWAS: Fastq to BAM to VCF
... I'm analyzing NGS data on website:usegalaxy.org in the following steps: 1. Fastq file Raw reads QC FASTQ Groomer FASTQ Trimmer 2. Convert to Fastqsanger file 3. Map to reference (Map with BWA for Illumina) 4. Convert SAM file to BAM 5. Mark to Duplicates (Picard tools) or make a VCF file. 6. An ...
bam fastq vcf variant gwas written 2.5 years ago by nvlinh.dth10 • updated 2.5 years ago by Jennifer Hillman Jackson25k

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