User: Ravi Karra

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Ravi Karra10
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Posts by Ravi Karra

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Pre-Processing Of Illumina Rna-Seq Paired End Data
... Hello, I have Illumina 76bp paired end data for a zebrafish RNA-seq experiment and am basically stuck while trying to pre-process my data prior to using Tophat/CuffDiff. For each sample, I have a read1 fastq file and a paired read2 fastq file. After using FASTQ Groomer, I trimmed the ends using F ...
rna-seq cuffdiff written 6.7 years ago by Ravi Karra10 • updated 6.7 years ago by Victor Ruotti90

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