User: Jack Colicchio

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Posts by Jack Colicchio

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Tophat Settings
... In the new version of tophat they allow for over 3 mismatches in the initial alignment, however your server still gives an error if you attempt to move this over 3. This is problematic for trying to map RNAseq reads where there is moderate divergence between the RNA and the reference genome. Jack ...
rna-seq tophat written 6.0 years ago by Jack Colicchio10 • updated 6.0 years ago by Jeremy Goecks2.2k

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