User: jxmarkfernandez

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Posts by jxmarkfernandez

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problems with SAM-to-BAM tool
... Dear sirs, I run the SAM-to-BAM tool during a ChIPseq mapping workflow and received this error: Samtools Version: 0.1.18 (r982:295) Error sorting alignments from (/galaxy-repl/main/jobdir/011/855/11855472/tmpc21bFP/tmpvHS6E0), Some days ago I run this workflow exactly the same way and this error ...
samtools tool error written 2.3 years ago by jxmarkfernandez0 • updated 2.2 years ago by Jennifer Hillman Jackson24k
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Put header to bigwig file
... Hello, I am working with ChIPseq with Histone marks on chicken (Gal/Gal4). I generated a bigwig file using the "bamcompare" tool in deepTools2 and now I want to upload it in UCSC. Nevertheless, I should give a header to the bigwig to upload it in UCSC, which I cannot do as Bigwig files are binary, ...
bigwig bamcompare galaxy chipseq header written 2.3 years ago by jxmarkfernandez0 • updated 2.3 years ago by Jennifer Hillman Jackson24k

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