User: sjn

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sjn10
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1 year, 9 months ago
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1 year, 10 months ago
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Posts by sjn

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Comment: C: Workflow Input data not recognizing the data set
... The original data was in fastqsanger format, which I downloaded from GEO and the analysis was fine. But data was not recognized after copying to a new history. In the new history, I first attempted to switch the data type to fastqsanger (it was showing fastq) but did not work. I had to groom the dat ...
written 21 months ago by sjn10
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Comment: C: Workflow Input data not recognizing the data set
... Thanks for the suggestion. It worked when the data was groomed fastqsanger format. However, it is still puzzling why the original data was not recognized. I used the same data set in Galaxy to do analysis and it worked. All I did was copy the data set to a new history and then called a different wor ...
written 21 months ago by sjn10
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Workflow Input data not recognizing the data set
... I have extracted workflow for ChIPseq analysis from my work history. When I call this workflow to run another data set input data is not recognizing the fastq file. Any idea what is going on? ...
galaxy written 21 months ago by sjn10 • updated 21 months ago by Jennifer Hillman Jackson23k
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Homer for Motif search
... Hi,    I would like to use HOMER to search for enriched motif on a ChIPseq analysis I did using Galaxy. How can I use the tool that is available in Toolshed. From basic search I found that one can add anything from Toolshed to local galaxy by signing in as admin. But I am using public server and my ...
galaxy written 22 months ago by sjn10 • updated 22 months ago by Jennifer Hillman Jackson23k

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