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Posts by RG
... Hi all, I am trying to generate differential peaks of 2 sets of ChIP-seq experiments: cells treated with 2 different chemicals by using MACS2 bdgdiff. I am following tips from Tao https://github.com/taoliu/MACS/wiki/Call-differential-binding-events So first I run MACS2callpeak with input and ChI ...
... Hi all, I am struggling to find a way to calculate DMRs from MeDIP-seq data in Galaxy. I know there are plenty R based program to do this, however since I am a total R-noob I will be limited to galaxy. We have 2 different seq samples from: control treated cells and cells treated with a cytokine. ...
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