User: xcalle91

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xcalle910
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European Union
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2 years, 8 months ago
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2 years, 9 months ago
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Posts by xcalle91

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(Closed) STAR aligner generating genomes takes long time
... Hi, I'm trying to use the STAR  ultrafast aligner, first I need to generate a genome to align to, so, as it is described in the manual I run this command line:     /pathToStarDir/STAR --runMode genomeGenerate --genomeDir /path/to/GenomeDir --genomeFastaFiles /path/to/genome/*.fa --runThreadN 11   ...
genome star rna-seq written 2.7 years ago by xcalle910
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Galaxy subtract intervals genome
... Hi! I'm using Galaxy (Operate in genomic intervals : Subtract) to remove exons from a track. this operation works fine but the problem is that my track also has a column for the score of each region, this column is missing  when I subtract the exons. Is it anyway to say Galaxy to keep this column i ...
subtract galaxy written 2.8 years ago by xcalle910 • updated 2.8 years ago by Jennifer Hillman Jackson25k

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