User: cbb.chintan

gravatar for cbb.chintan
cbb.chintan10
Reputation:
10
Status:
New User
Location:
United States
Last seen:
2 years, 10 months ago
Joined:
2 years, 10 months ago
Email:
c**********@gmail.com

Posts by cbb.chintan

<prev • 7 results • page 1 of 1 • next >
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Comment: C: Blast sequence using bacterial genome of ncbi
... Hello, I am able to download blast+ package after removing "#" this from tool_dependency_dir = dependency_dir in galaxy.ini file. But, again i am facing another problem. When i try to install this i got following message. File "/home/qiime/galaxy/lib/tool_shed/galaxy_install/install_manager.py", lin ...
written 2.8 years ago by cbb.chintan10
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Comment: C: Blast sequence using bacterial genome of ncbi
... Thank you for your reply. As you suggested me to go to link in previous mail I did the same procedure and installed ncbi_blast_plus using tool shed. Then, i tried to download both Dependencies of this repository, [1] blast datatypes, [2]"package_blast_plus_2_2_31" as required by tool. I am able to ...
written 2.9 years ago by cbb.chintan10
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Blast sequence using bacterial genome of ncbi
... Hello, I have installed my galaxy on local server and successfully and added NCBI BLAST plus. I want to blast my nucleotide sequence with bacteria genome for getting protein sequences (tBlastn or Blastx). But when I try,  it shown there is no Reference NCBI blast genome available.   Best, Chinta ...
blastp bacterial ncbi genome written 2.9 years ago by cbb.chintan10 • updated 2.9 years ago by Jennifer Hillman Jackson25k
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Answer: A: How upload files
... Hello,   you can download your data in online galaxy platform by using "GET DATA" on left side or "LOAD OUR OWN DATA" on eight side. Click anyone, then select your file and select start. After completion close that box and you will find your data on right side.   Best, chintan ...
written 2.9 years ago by cbb.chintan10
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Comment: C: Add NCBI BLAST
... Thank you for reply. You are correct i had already added admin_users = cbb.chintan@gmail.com I have also attached galaxy.ini file that is available in config folder. please find attachment. thanks, Chintan ...
written 2.9 years ago by cbb.chintan10
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Comment: C: Add NCBI BLAST
... Hello, I am facing other problem now. I installed galaxy as local galaxy using ubuntu in virtual box. I followed the james video and stuck in between. I lunched command sh run.sh and i got output as ~ middleware: /plugins/visualizations/scatterplot/static, ./config/plugins/visualizations/scatterplot ...
written 2.9 years ago by cbb.chintan10
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Add NCBI BLAST
... I am new to galaxy. I did not configured my galaxy on any local machine. I want to add NCBI BLAST +++ to my tools in homepage of galaxy.   How i can do it?         ...
galaxy blast ncbi written 2.9 years ago by cbb.chintan10 • updated 2.9 years ago by Jennifer Hillman Jackson25k

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