User: marcioslash

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Posts by marcioslash

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Comment: C: Error with Filter tool from galaxy
... Yes ... the reads filtered in this archive are all bellow 18, different from the reads that are in galaxy.   I tested it with Fastqc (same paramenters as galaxy) and i opened this file in Geneious ... the result is that all the bases are bad quality ...    I really dont know how i can downlad th ...
written 2.7 years ago by marcioslash0
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Comment: C: Error with Filter tool from galaxy
... 70: Filter FASTQ on data 25 71: Filter FASTQ on data 29   When i download it to my computer and Run Fastqc, all reads bases are all below 18 quality !     ...
written 2.7 years ago by marcioslash0
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Answer: A: Error with Filter tool from galaxy
... Here is the history     https://usegalaxy.org/u/marcio-godinho/h/ngsvirus ...
written 2.7 years ago by marcioslash0
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Error with Filter tool from galaxy
... I new user in galaxy, so a i'm having a problem with it  I'm analysing NGS Data, so: 1 - I uploaded the files into my galaxy account 2 - Use Fastqc to verify quality 3 - Filtered the reads using Filter FASTQ - minimum score 30 - and cut 9 nt from  5' end 4 - Use Fastqc again to verify quality ...
galaxy filter qa fastqc fastq written 2.7 years ago by marcioslash0 • updated 2.5 years ago by Jennifer Hillman Jackson24k

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