User: Davide Cittaro

gravatar for Davide Cittaro
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Last seen:
7 years, 4 months ago
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10 years ago
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d*************@ifom-ieo-campus.it

Posts by Davide Cittaro

<prev • 14 results • page 1 of 2 • next >
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Comment: C: 2011 Galaxy Community Conference, May 25-26, Lunteren, The Netherlands
... Too bad I won't attend the meeting this time! :-( d ...
written 7.4 years ago by Davide Cittaro140
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Comment: C: Group-Based Permissions
... Hi Greg, thanks for that Well, removing any role to the access list makes it public... :-) I think that this may be added in the "bulk operations" galaxy may support (i.e. bulk data type changing, bulk genome changing, bulk permission editing...) d /* Davide Cittaro Cogentech - Consortium for ...
written 7.8 years ago by Davide Cittaro140
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Comment: C: Group-Based Permissions
... Thanks, and about this, is there a way to reset permissions so that everything is public? d /* Davide Cittaro Cogentech - Consortium for Genomic Technologies via adamello, 16 20139 Milano Italy tel.: +39(02)574303007 e-mail: davide.cittaro@ifom-ieo-campus.it */ ...
written 7.8 years ago by Davide Cittaro140
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Group-Based Permissions
... Hi all, I would like to give access permission on our data libraries using Groups. Apparently I can only assign permissions to Users and Roles... Is this a bug or a feature? d /* Davide Cittaro Cogentech - Consortium for Genomic Technologies via adamello, 16 20139 Milano Italy tel.: +39(02)574303 ...
written 7.8 years ago by Davide Cittaro140 • updated 7.8 years ago by Greg Von Kuster810
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Answer: A: Data Storage
... Hi, AFAIK most of the data will be duplicated in uploading/importing. I suggest you to deploy galaxy on a filesystem that has deduplication capabilities. I've successfully installed galaxy on Nexenta CP3 + ZFS (waiting for Illumos). Recent ZFS builds support deduplication and compression. HTH d ...
written 7.8 years ago by Davide Cittaro140
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Comment: C: Display A Bed With Track Definition Line
... Hi Jennifer, Right, I may try to create a workflow for this. Meanwhile I've created a xml display_application trying to override the default bed display. BTW, I've asked the UCSC team if it will be possible to override track definitions via CGI variables... if the feature request will be accepted ...
written 7.9 years ago by Davide Cittaro140
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Display A Bed With Track Definition Line
... Hi there, is there a way to display a bed file to UCSC setting the track name and description automatically? I mean, if the bed file contains only the data tabular data, how can I add "track type=bed name=dataset.name" at display time? I get a generic "User track" instead, that means that I have to ...
written 7.9 years ago by Davide Cittaro140 • updated 7.9 years ago by Jennifer Hillman Jackson25k
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Answer: A: Search In Libraries
... I mean, does it only work at "first level"? d /* Davide Cittaro Cogentech - Consortium for Genomic Technologies via adamello, 16 20139 Milano Italy tel.: +39(02)574303007 e-mail: davide.cittaro@ifom-ieo-campus.it */ ...
written 8.0 years ago by Davide Cittaro140
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Search In Libraries
... Hi all, how does the library search tool work? I'm trying on the public galaxy but I can't get any result... d /* Davide Cittaro Cogentech - Consortium for Genomic Technologies via adamello, 16 20139 Milano Italy tel.: +39(02)574303007 e-mail: davide.cittaro@ifom-ieo-campus.it */ ...
galaxy written 8.0 years ago by Davide Cittaro140
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Comment: C: Pysam Egg
... Mmm... why on earth are you using python 2.4? Are you on RedHat / CentOS distribution? I've built the egg on CentOS 5.3, using native python... :-) Glad to hear that! d /* Davide Cittaro Cogentech - Consortium for Genomic Technologies via adamello, 16 20139 Milano Italy tel.: +39(02)57430300 ...
written 8.4 years ago by Davide Cittaro140

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