User: yonexhalaolv

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United States
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2 years, 4 months ago
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2 years, 6 months ago
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Posts by yonexhalaolv

<prev • 4 results • page 1 of 1 • next >
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Tarcking ID in cuffnorm output and TestID (geneID) in cuffdiff output, are they the same?
... Dear all, I found in the output of cuffnorm there was no locus information corresponding to my de novo assembly, whereas in the output of cuffdiff, there was a column telling the loci of differentially expressed genes so that I can map the loci with the BLAST output.  The reason I did both was bec ...
cuffdiff galaxy rna-seq written 2.5 years ago by yonexhalaolv0
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Can someone recalculate my disk space?
... Dear admin, Before I can do anything, I really need my space to be recalculated. It's been 5days since I deleted my SAM files but  my history still shows 300GB in use.  Many thanks.   ...
disk quota written 2.5 years ago by yonexhalaolv0 • updated 2.5 years ago by Dannon Baker3.7k
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Can anyone share a workflow of differential gene expression on multiple conditions (>3) and triplicates?
... Hey guys, I just started using Tophat-cufflink on Galaxy today. But the example I found was quite simple (2 samples comparison) and I got a bit confused. I have the ILLUMINA RNA-seq data from 3 different niches and within each niche there were 3 replicates. I did the de novo assembly using transABb ...
cufflinks galaxy tophat rna-seq written 2.5 years ago by yonexhalaolv0 • updated 2.3 years ago by Jennifer Hillman Jackson23k
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How to cancel multiple jobs in galaxy?
... Hey all, I just started to analyse my RNA-seq data in Galaxy. I started multiple FastQC jobs but now I wanted to cancel them so I delete them from history but it seemed they were still running as I couldn't change my datatype. Any suggestion?  Many thanks ...
galaxy rna-seq written 2.5 years ago by yonexhalaolv0 • updated 2.5 years ago by Jennifer Hillman Jackson23k

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