User: vowinkel.alexander

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Posts by vowinkel.alexander

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Comment: C: delete many galaxy tools (admin)
... nope, sorry. but maybe it has changed by now. My information is from around the time I asked. ...
written 23 months ago by vowinkel.alexander10
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Comment: C: Confusing FastX_Barcode_Splitter Error
... you're working on the public galaxy server? ...
written 3.2 years ago by vowinkel.alexander10
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dataset filesystem names overflow
... AFAICS the datasets are saved as dataset_XXX.dat. I'm wondering now what happens when XXX exceeds 9223372036854775807 (2^63 - 1). ...
internals written 3.2 years ago by vowinkel.alexander10
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list collection output - format set from input
... I have an input, that can be fasta,fastqsanger,fastqillumina: <param name="fastq_input1" type="data" format="fasta,fastqsanger,fastqillumina" label="Select the fastq file" help="Specify fastq file with reads"/> I have multiple outputfiles - bundled in a list collection: <collection nam ...
collection development tool written 3.2 years ago by vowinkel.alexander10
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Comment: C: delete many galaxy tools (admin)
... Nice. But the example doesn't help me so much. I can't find a full list of this API paths and parameters. How could I delete a repository? ...
written 3.3 years ago by vowinkel.alexander10
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delete many galaxy tools (admin)
... How can I delete multiple tools from my galaxy installation? So far I just know how to uninstall single ones through "Manage installed tool shed repositories" - But this is quite nasty if I want to uninstall many of them. ...
tools galaxy admin written 3.3 years ago by vowinkel.alexander10
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Comment: C: Cloud Man - job triggering
... And how is the "memory available" estimated? If I have a job, taking 2h, first hour little mem, 2nd hour very much ram. How is assured that an instance doesn't run out of memory (e.g. because another process is put on the same node during the 1st hour)? ...
written 3.3 years ago by vowinkel.alexander10
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Cloud Man - job triggering
... When I have jobs that have different memory and CPU requirements, is it possible to somehow specify what kind of node I want this job to be run on? For example a high memory process/job I want to run on a amazon memory node, a high CPU process/job on a high CPU node. Sometimes I have jobs that can ...
cloud man written 3.3 years ago by vowinkel.alexander10 • updated 3.3 years ago by Dannon Baker3.7k
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cloud man - list of amazon node types
... In the CloudMan Console you can add computing nodes. How can I adapt the list of node types? In this particular case I want to use the c3/c4 instances for computing. ...
amazon cloud man written 3.3 years ago by vowinkel.alexander10 • updated 3.3 years ago by Enis Afgan690

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