User: leiah.luoma

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Canada
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Posts by leiah.luoma

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Running MACS locally
... Hello, I have downloaded my ChIP-seq data which I aligned to the human genome using Bowtie for Illumina on Galaxy, and have installed MACS on my computer (4Gb RAM) and gotten it running in CMD/DOS.  Unfortunately my data files appear too large to run locally (25Gb [90 000 000 lines] input control, ...
chip-seq macs written 3.0 years ago by leiah.luoma0 • updated 3.0 years ago by Jennifer Hillman Jackson25k
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Job starts running then is resubmitted and queued
... Hi, I have submitted multiple jobs to both Bowtie2 and Bowtie for Illumina, and although 2 of them have completed (one in Bowtie2, one in Bowtie for Illumina), the others (started within minutes of the other) started processing (colored yellow), continued for a few hours, and then returned to queue ...
bowtie queue written 3.1 years ago by leiah.luoma0 • updated 3.1 years ago by Jennifer Hillman Jackson25k

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