User: k.z.sutton

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k.z.sutton0
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Posts by k.z.sutton

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Answer: A: data manager problem - building Bowtie Index for hg19
... Yes, pane is green at end of index build and the ref genome appears as an option in bowtie2 - but the alignment in bowtie2 fails at start due to no index file. I did do a Server restart- didn't help. Also done a couple of clean installs of galaxy to make sure it wasn't any other tool/dependency inte ...
written 3.6 years ago by k.z.sutton0
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data manager problem - building Bowtie Index for hg19
... I am testing out the process of setting up a local galaxy host - for analysis of clinical exome samples. Basic install is fine and runs ok. But I am having issues building local reference genomes. I have trying to use the Bowtie Index builder (rev. 5515ee3559f0). This works fine for SacCer2, but wh ...
galaxy bowtie data managers written 3.6 years ago by k.z.sutton0

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