Moderator: Istvan Albert

gravatar for Istvan Albert
Istvan Albert250
Reputation:
250
Status:
Trusted
Location:
University Park
Last seen:
1 year, 5 months ago
Joined:
12 years, 4 months ago
Email:
i************@gmail.com

Posts by Istvan Albert

<prev • 25 results • page 1 of 3 • next >
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Comment: C: No output from Cuffdiff
... The author of a post or moderators may close/delete a posts (using the moderate link) but only moderators can reopen them. It occasionally happens that a user accidentally deletes their own post but then they cannot reopen it nor will they be able to see the post. I usually reopen the post and ask ...
written 4.0 years ago by Istvan Albert250
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Answer: A: Getting Started with Galaxy Biostar
... A new feature has been added to Biostar Galaxy, all posts can now be answered via email. Just hit reply in your email client and the reply will be posted as a comment. (this is really a test for this feature) ...
written 4.0 years ago by Istvan Albert250
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Comment: C: Filter SAM or BAM
... MAPQ quality of 255 is useless information. That field shows the mapping quality as a probablitity. The 255 is there because that version of software (bowtie1 most likely) is unable to fill it in correctly therefore puts the largest valid value there. So forget about the MAPQ and move on to the ne ...
written 4.1 years ago by Istvan Albert250
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Comment: C: How do I obtain uniquely mappable reads from bowtie on galaxy?
... unmapped reads will be dropped, those can't be turned into BED records ...
written 4.1 years ago by Istvan Albert250
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Comment: C: Welcome to Galaxy Biostar
... Let me turn if off then for now, since there would be very few posts to choose from. Then we'll turn it on back later, where I'll add the selection feature as well. ...
written 4.1 years ago by Istvan Albert250
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Comment: C: Welcome to Galaxy Biostar
... I see, let me describe what is going on there. There is a so called "bump" feature that people  on Biostars have requested. It is to remind them of older posts and freshen the view during slower days. The bumping takes place every six hours. It has a 50% chance to choose either one random question ...
written 4.1 years ago by Istvan Albert250
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Comment: C: Welcome to Galaxy Biostar
... It is possible to have an auto-accept applied retroactively and probably the vast majority would be correct. The problem is really the remaining 10-15% where the answer may not be correct or a solution was not reached yet the algorithm would still add that mark. I think that would greatly diminish ...
written 4.1 years ago by Istvan Albert250
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Comment: C: Visualizing BowTie2 BAM File?
... take a screenshot upload into a site like http://www.imgur.com and paste the link into a post ...
written 4.1 years ago by Istvan Albert250
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Comment: C: Genetrack-Indexer/Peakpredictor
... Hello Everyone, I think in general you should make sure to cite the authors of the original publication in addition to Galaxy, the note in Galaxy should make this explicit. Small tidbits that may be useful. There is a command line version for genetrack with its source code at: https://github.co ...
written 6.5 years ago by Istvan Albert250
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Answer: A: Error Running Galaxy On Windows Xp
... Hello Ryan, does your Internet Explorer need some proxy settings when connecting to the Internet? Given the type of the error this would be my first guess. Setting IE to work certain ways affects how the network library will work from other applications as well, in this case python. Istvan. ...
written 12.1 years ago by Istvan Albert250

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