User: mateusbellomo

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2 years, 6 months ago
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Posts by mateusbellomo

<prev • 16 results • page 1 of 2 • next >
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Comment: C: gplots R getting run error
... Actually the job is failing. I'm not using any specific tutorial (I didn't find a specific tutorial in R tools) and any wrapper as a guide (could you please indicate me some?). I think it's something to do to 'gplots' package because I already tested other R functions and it worked. I'm trying to e ...
written 2.5 years ago by mateusbellomo10
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gplots R getting run error
... Hello,   I'm developed a tool to generate a heatmap using heatmap.2() function from gplots of R. Unfortunately I'm getting an error when I try to execute it in Galaxy. When I run the tool from terminal it works perfectly though. I think it's because the gplots package of R because when I comment i ...
R gplots written 2.5 years ago by mateusbellomo10
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Comment: C: workflow error tool_state
... I found out what it was. I couldn't use the word "type" as an input param name. It causes the error I was getting.   Thanks for the help Jennifer.   Cheers ...
written 3.2 years ago by mateusbellomo10
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Comment: C: workflow error tool_state
... I think you do could produce the same error. You need to build a workflow with a tool that has some input parameter which type is select. If you try to change the default value of this parameter in the workflow you get the error that I said before. ...
written 3.2 years ago by mateusbellomo10
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workflow error tool_state
... Hello,   I'm getting an error when I try to change de default attribute of some tool in Galaxy workflow. When I change it and try to save, it gives me a "tool_state" error. The message is a little big so I won't post here unless you want to.   Thanks in advance.   Mateus ...
workflow tool_state written 3.2 years ago by mateusbellomo10 • updated 3.2 years ago by Jennifer Hillman Jackson25k
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Comment: C: variable inputs workflow
... I just figured it out how to do it. \o I used the data set collection and created a list of the input files. This way I the user could select variable number of inputs, create a list and run the workflow after. Thank you all for the help! ...
written 3.2 years ago by mateusbellomo10
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Comment: C: variable inputs workflow
... Hi Guy, I've tried this but when I run the workflow it separates my inputs and run one time for each input in the list. I want to run the workflow for all the inputs in the list in the same flow (only once). To explain better, the first tool of the workflow takes several input files and generate on ...
written 3.2 years ago by mateusbellomo10
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Comment: C: variable inputs workflow
... The problem is that this input is inside a repeat tag where the user have to specify some another information about that input. I think I couldn't solve this problem using data-collections since that's not just a file that the user has to input. Thanks ...
written 3.2 years ago by mateusbellomo10
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Comment: C: variable inputs workflow
... If you mean the same format then yes. The content is different. The user could select variable number of files to input in the tool. ...
written 3.2 years ago by mateusbellomo10
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variable inputs workflow
... Hello,   I'm trying to create a workflow that has a tool with variable number of inputs. I've searched on this forum to some help but all the questions about that were made about 3 years ago. I'm wondering if you already solved this problem.   Thanks in advance,   Mateus ...
variable inputs workflow written 3.2 years ago by mateusbellomo10 • updated 3.2 years ago by Guy Reeves1.0k

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