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Posts by danderson
Answer: A: hg38 GFF3/GTF source
... Thanks for you help Jen! I will go back to hg19. Dan ...
... Hi, I am trying to use cuffdiff to compare relative gene expression from some human cell line samples. I used the hg38 canonical reference genome with tophat for illimina to map the reads. I am now having trouble finding the appropriate GFF3/GTF file to use for cuffdiff. I tried the Ensemble GFF ...
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