User: Guy Reeves

gravatar for Guy Reeves
Guy Reeves850
Reputation:
850
Status:
Trusted
Location:
Germany
Last seen:
15 hours ago
Joined:
2 years, 4 months ago
Email:
r*****@evolbio.mpg.de

Posts by Guy Reeves

<prev • 200 results • page 1 of 20 • next >
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Answer: A: Is it possible to specify the download folder to be on the server hosting the ga
... it could be that this tool is the answer https://toolshed.g2.bx.psu.edu/view/earlhaminst/export_to_cluster/ came from this board https://github.com/galaxyproject/tools-iuc/issues/1295 ...
written 6 days ago by Guy Reeves850
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Answer: A: gff to gtf conversion
... There is a Tool that does this now https://toolshed.g2.bx.psu.edu I used it to change a .GFT file to a .GFF3 file. But I think it goes the other way. It is on usegalaxy.org Cheers Guy ...
written 9 days ago by Guy Reeves850
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Answer: A: How to align 500 fastq unpaired files to an uploaded reference and put every sin
... This question is largely answered in https://biostar.usegalaxy.org/p/22908/ Just change the tools used in the workflow. ...
written 15 days ago by Guy Reeves850
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Comment: C: Is it possible to specify the download folder to be on the server hosting the ga
... it was already being worked on https://github.com/galaxyproject/galaxy/issues/2968 ...
written 17 days ago by Guy Reeves850
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Answer: A: How to annotate 500 vcf files using SNPEff or smth else and put every separate r
... OK so if you have 500 VCF files in a history. AND dataset renaming works for this tool (it does for 90% of tools). 1 make a short workflow with any data input datasets joined to the SNPEff tool. Using the workflow is to enable you to use the dataset renaming capacity. In the workflow window of ...
written 18 days ago by Guy Reeves850
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Comment: C: How to annotate 500 vcf files using SNPEff or smth else and put every separate r
... If the datasets (files) are named with the SRA identifier then there is a way which I can explain. ...
written 19 days ago by Guy Reeves850
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Comment: C: Is it possible to specify the download folder to be on the server hosting the ga
... Thanks I have posted a question to the great tool developers [https://github.com/galaxyproject/tools-iuc/issues/1295][1] [1]: https://github.com/galaxyproject/tools-iuc/issues/1295 ...
written 19 days ago by Guy Reeves850
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Comment: A: Is it possible to specify the download folder to be on the server hosting the ga
... @Martin or anybody else who can point me in the right direction. We are thinking about adapting this tool [‘bundle_collections’][1] but have no idea how to make a galaxy tool point outside itself. do you have any idea how we might do this? Thanks Guy [1]: https://toolshed.g2.bx.psu.edu/reposi ...
written 22 days ago by Guy Reeves850
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Comment: A: Is it possible to specify the download folder to be on the server hosting the ga
... Thanks .Yes a suppose a it would be a reverse FTP. Can I ask, when you select the' export history to file' where is the file actually generated? I think as files become bigger and bigger the users hard drive looks less and less attractive to download to. Unfortunately tool development is beyond me ...
written 28 days ago by Guy Reeves850
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Is it possible to specify the download folder to be on the server hosting the galaxy instance?
... Hi I would like to know if it possible to for an administartor to specify (presumably in some config file) that when a user presses the download button, the file is not downloaded to the hard drive they are currently working on to a folder on the same server. This would be really useful for our ...
export dowload config administrator written 29 days ago by Guy Reeves850

Latest awards to Guy Reeves

Teacher 11 weeks ago, created an answer with at least 3 up-votes. For A: How to successfully export large numbers of files outside of galaxy- as history
Scholar 11 weeks ago, created an answer that has been accepted. For A: increasing the number of concurent jobs that can be run
Scholar 8 months ago, created an answer that has been accepted. For A: increasing the number of concurent jobs that can be run
Voter 18 months ago, voted more than 100 times.
Scholar 18 months ago, created an answer that has been accepted. For A: Without 'Available inputs are:' it is not possible to rename datasets in workflo
Scholar 18 months ago, created an answer that has been accepted. For A: Attaching annotations to Sequences
Centurion 19 months ago, created 100 posts.
Scholar 22 months ago, created an answer that has been accepted. For A: Attaching annotations to Sequences
Student 2.1 years ago, asked a question with at least 3 up-votes. For What is the ROD file -Need help with "Realigner Target Creator" tool
Rising Star 2.1 years ago, created 50 posts within first three months of joining.
Teacher 2.1 years ago, created an answer with at least 3 up-votes. For A: variable inputs workflow
Supporter 2.1 years ago, voted at least 25 times.
Student 2.3 years ago, asked a question with at least 3 up-votes. For What is the ROD file -Need help with "Realigner Target Creator" tool

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