User: kara.powder

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Posts by kara.powder

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commonly used mapping mode parameters on lastz
... What are the specific parameters for all of the commonly used mapping modes in lastz? In other words, if I wanted to run the "Roche-454 75% identity" mode either using the full parameter list or on command line, what settings do I need to put in? ...
mode mapping parameters lastz written 9 weeks ago by kara.powder0 • updated 9 weeks ago by Jennifer Hillman Jackson22k
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Comment: C: Error with Lastz mapping
... Thanks Jen. It looks like it's working again. I'll do the bug report if i have further problems. ...
written 18 months ago by kara.powder0
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Answer: A: Error with Lastz mapping
... Hi Jen, It looks like the issue was closed today, but I just ran Lastz and sam still getting the same error that I have bene getting for a few days now: python: can't open file '/galaxy/main/migrated_tools/toolshed.g2.bx.psu.edu/repos/devteam/lastz/0801f8207d30/lastz/lastz_wrapper.py': [Errno 2] N ...
written 18 months ago by kara.powder0

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