User: Felix Hammer

gravatar for Felix Hammer
Felix Hammer200
Reputation:
200
Status:
New User
Location:
Last seen:
7 years, 7 months ago
Joined:
7 years, 9 months ago
Email:
h******@cip.ifi.lmu.de

Posts by Felix Hammer

<prev • 18 results • page 1 of 2 • next >
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Galaxy Down
... Dear Galaxy Team! When will Galaxy approximately be up again? Thx, Felix ...
galaxy written 7.6 years ago by Felix Hammer200 • updated 7.6 years ago by Dannon Baker3.7k
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Galaxy Down?
... Hi, is there currently a problem with the Galaxy Server? When will it be up again? thx, Felix ...
galaxy written 7.7 years ago by Felix Hammer200 • updated 7.7 years ago by Nate Coraor3.2k
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Comment: C: Cleaning Of Fastq Files
... Hey Jen, I've already solved the cleaning problem using Seqclean. Seqclean only takes fasta as input. So if you are dealing with fastq files, you have to split them into quality and fasta, clean the fasta file, trim the quality strings by yourself and put everything back together ... (If someone kno ...
written 7.7 years ago by Felix Hammer200
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Bowtie Job Doesn'T Start
... Hi, just trying to use Bowtie, but the job does not start. Is there somthing wrong with the server at the moment? Felix ...
bowtie alignment written 7.7 years ago by Felix Hammer200 • updated 7.7 years ago by Nate Coraor3.2k
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Answer: A: Upload Of Zea Mays Genome To Galaxy?
... Last time I checked there was an up to date zea mays genome already available in galaxy. Am 05.03.2011 21:49, schrieb karlerhard@berkeley.edu: ...
written 7.7 years ago by Felix Hammer200
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Join And Sort In Galaxy
... Hello, I have some questions about the Join and Sort tools in Galaxy. How are they implemented? Just the standard unix sort and join? I have a quite large tab file (~1,5 million lines), I want to join with a somewhat smaller file (~20 000 lines). How long will this approximately take? Is there a w ...
galaxy written 7.7 years ago by Felix Hammer200 • updated 7.7 years ago by Jennifer Hillman Jackson25k
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Cleaning Of Fastq Files
... Hi, is there a way to clean fastq files (filter Poly-A etc.) with Galaxy? Haven't found anything so far. Also if you generally know good tools plz answer. Have seen lots of stuff for fasta and qual files but not for fastq. Thx, Felix ...
galaxy written 7.7 years ago by Felix Hammer200 • updated 7.7 years ago by Jennifer Hillman Jackson25k
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Comment: C: Group And Hide Steps In History/Workflow
... Ah, I've figured it out now :) thx. Felix ...
written 7.7 years ago by Felix Hammer200
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Comment: C: Group And Hide Steps In History/Workflow
... I've done that. The intermediate outputs are hidden. But all the steps are still displayed. I want to hide those, too. Felix ...
written 7.7 years ago by Felix Hammer200
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Group And Hide Steps In History/Workflow
... Hi, it would be really nice if I could take a work flow and save it as a tool. This way one could easily build custom text-manipulation tools from already existing text tools. I already have a work flow that does a conversion job. But it has lots of of steps that make my histories quite messy when ...
written 7.7 years ago by Felix Hammer200 • updated 7.7 years ago by Peter Cock1.4k

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