User: jchen015

gravatar for jchen015
jchen01580
Reputation:
80
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Trusted
Location:
Singapore
Last seen:
2 years, 4 months ago
Joined:
2 years, 10 months ago
Email:
j*******@e.ntu.edu.sg

Posts by jchen015

<prev • 81 results • page 1 of 9 • next >
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Answer: A: Error in loading data to IGB from Galaxy
... Dear all,  the attached is the image that show a displaying of no data (that is linked from Galaxy). URL: https://www.dropbox.com/s/h4q55w7qzoxzh08/image.PNG?dl=0 ...
written 2.4 years ago by jchen01580
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Comment: C: Best way in backing up everything of Galaxy
... Thanks for everything Martin. I got it. Best, Julius ...
written 2.4 years ago by jchen01580
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Comment: C: Best way in backing up everything of Galaxy
... I believe I am using SQLite, because I did not include any MySql or PostgresSQL into the implementation of Galaxy.  Is that ok? ...
written 2.4 years ago by jchen01580
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Comment: C: Best way in backing up everything of Galaxy
... Hey Martin, by saving the whole directory means the whole database is backup already, am I right? ...
written 2.4 years ago by jchen01580
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Comment: C: Best way in backing up everything of Galaxy
... Hi Martin Allow me to understand better. Do you mean that, if I save the whole directory of Galaxy, and the server restarted, all I need to do is just put back this directory into the original path and everything will be back as per normal? Best, Julius ...
written 2.4 years ago by jchen01580
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Best way in backing up everything of Galaxy
... Dear all My local galaxy instance is hosted inside a server, located in a data center. However, the data center is going to reset its power scheduler and there may be a risk for power failure, which may result in the loss of all data. May I know of the best practices on backing up everything i ha ...
backup written 2.4 years ago by jchen01580 • updated 2.4 years ago by Martin Čech ♦♦ 4.0k
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Error in loading data to IGB from Galaxy
... Dear All I have installed Integrated Genome Browser in my local workstation. I uploading the same data file (BAM format) to both public galaxy server and my local server. After which i click on "display in IGB view" to visualize it. The data were properly visualized in through public Galaxy serve ...
galaxy igb written 2.4 years ago by jchen01580 • updated 2.4 years ago by Daniel Blankenberg ♦♦ 1.6k
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Is there a tool for displaying statistics result of a gene ?
... Dear All Is there an existing tool which could do a search on existing genes and print out the short reads in the genes? For example (reference the link here: https://www.dropbox.com/s/04f6uemsljlcott/20150414_004523.jpg?dl=0 )   Regards, Julius ...
counting_reads written 2.4 years ago by jchen01580 • updated 2.4 years ago by Jennifer Hillman Jackson22k
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Comment: C: How to develop a simple function/tool on local galaxy
... Hi Martin Thanks alot. Is because of the .main suffix.   ...
written 2.4 years ago by jchen01580
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Comment: C: How to develop a simple function/tool on local galaxy
... Hi Martin So i went through the first tutorial (https://wiki.galaxyproject.org/Admin/Tools/AddToolTutorial) and tried to follow the example instructions. However, the result was not shown:    Image link that shows both .xml and .pl file is in myTools folder ( http://goo.gl/7eEBH6 ) Image link t ...
written 2.4 years ago by jchen01580

Latest awards to jchen015

Scholar 2.5 years ago, created an answer that has been accepted. For A: How to leverage on an existing fasta file as a reference genome build (dbkey)
Scholar 2.7 years ago, created an answer that has been accepted. For C: Unable to upload (.bam) data file to local Galaxy

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