User: KeyGene

gravatar for KeyGene
KeyGene10
Reputation:
10
Status:
New User
Location:
Netherlands
Last seen:
2 years, 10 months ago
Joined:
3 years, 2 months ago
Email:
K************@keygene.com

Posts by KeyGene

<prev • 11 results • page 1 of 2 • next >
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Comment: C: Next line in XML
... Hi Jennifer. Thanks for your reply, unfortunately I didn't make my question clear enough it seems. I meant that I want to introduce a next line immediately after the description tag. For example <description>\nHere is my description</description> so that when visiting the Galaxy interfac ...
written 3.0 years ago by KeyGene10
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Next line in XML
... I am wondering if it is possible to introduce empty lines / next line breaks to the description of a tool in Galaxy? So that it will become more visually attractive (description below tool name) <description>Read mapping and variant calling</description>   ...
galaxy tool line written 3.0 years ago by KeyGene10 • updated 3.0 years ago by Jennifer Hillman Jackson23k
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Comment: C: URGENT! Galaxy Account no longer accessible!! Please help ASAP!
... Very dangerous to post your password I suppose... ...
written 3.2 years ago by KeyGene10
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Comment: C: <filter> Tags not working for nested conditionals.
... Thanks for the input! I just changed the xml file as Wolfgang suggested, and that works ;) ...
written 3.2 years ago by KeyGene10
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Comment: C: <filter> Tags not working for nested conditionals.
... Thanks for your input! I've simplified it indeed, and it works now.  ...
written 3.2 years ago by KeyGene10
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<filter> Tags not working for nested conditionals.
... Hi! I have written a tool that lets the user deside what to do, and depending on those decisions output is generated. If a user chooses to analyse a single fastq file, output is written in "output.fastq". If the use decides to analyse paired-end fastq files, output is written in "output.1.fastq" and ...
filter galaxy condition output written 3.2 years ago by KeyGene10 • updated 3.2 years ago by Bjoern Gruening4.8k
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Answer: A: from_work_dir tags not working in Galaxy output
... Hi all! Apologies, but it turned to be an error in de script itself. Weird though there wasn't a sterr produced, but ok.  ...
written 3.2 years ago by KeyGene10
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Answer: A: from_work_dir tags not working in Galaxy output
... I don't know if this helps for any if you, but if I check the directory where files should be made, the output files remain empty for the analysis done with adding filepaths, and contain data for the analysis done with the browsing function. /opt/galaxy-dev/galaxy-dist/database/files/004 -rw-rw-r- ...
written 3.2 years ago by KeyGene10
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Comment: C: from_work_dir tags not working in Galaxy output
... This did not fix the problem unfortunately.... :( ...
written 3.2 years ago by KeyGene10
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Comment: C: from_work_dir tags not working in Galaxy output
... It should be. It is the exact same method as stated above. The only difference is the way of input (Path vs Browse) ...
written 3.2 years ago by KeyGene10

Latest awards to KeyGene

Scholar 3.2 years ago, created an answer that has been accepted. For A: from_work_dir tags not working in Galaxy output

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