User: mltlbrt

gravatar for mltlbrt
mltlbrt10
Reputation:
10
Status:
New User
Location:
United States
Last seen:
4 years ago
Joined:
4 years, 1 month ago
Email:
m******@yahoo.com

Posts by mltlbrt

<prev • 3 results • page 1 of 1 • next >
2
votes
2
answers
1.6k
views
2
answers
Realigner Target Creator in GATKtools
... Hi, I am attempting to realign with Realigner Target Creator in GATKtools. However, when I upload the BAM file, I keep getting the message, "Sequences are not currently available for the specified build". Also the reference genome dropdown tab says, "A built-in reference genome is not available for ...
realigner realigner target creator gatk gatktools written 4.0 years ago by mltlbrt10 • updated 3.1 years ago by marcosp0
0
votes
1
answer
1.0k
views
1
answer
BCF to VCF
... Hi, I am trying to convert a BCF file to VCF. I found instructions to go to NGS:Samtools>>bcftools view. However, there is no "bcftools view" link to click. Please help.   Thanks, Le-Ann ...
vcf bcftools tool bcf convert written 4.0 years ago by mltlbrt10 • updated 4.0 years ago by Jennifer Hillman Jackson25k
0
votes
2
answers
1.9k
views
2
answers
Problem with Refreence Genome in Gatk Tools
... Hi, I am attempting to run a variant call on Gatk. I used the "Validate Variants" tab first, however the reference genome list is not appearing. Shouldn't the reference file, hg19 be embedded in the software already or must I download it? It was embedded already as a reference file when I ran the ...
referncegenome gatk galaxy gatktools written 4.1 years ago by mltlbrt10 • updated 3.3 years ago by regina.casanova.900

Latest awards to mltlbrt

No awards yet. Soon to come :-)

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 16.09
Traffic: 140 users visited in the last hour