User: clijeron

gravatar for clijeron
clijeron10
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United States
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1 year, 5 months ago
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3 years, 2 months ago
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c*******@hunter.cuny.edu

Posts by clijeron

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Comment: C: Galaxy on a Centos Cluster + SLURM: how to configure runners?
... Hans, Thank you for the advise on PostgreSQL. I believe that if we use the InnoDB storage engine we can get a reliable database service on MySQL to support Galaxy as robust as PostgreSQL. Does anyone have any bad experience with MySQL or addition consideration we need to take? We are in our ear ...
written 2.2 years ago by clijeron10
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Galaxy on a Centos Cluster + SLURM: how to configure runners?
... Is there any guideline on how to setup an instance of Galaxy running on a cluster that uses SLURM as the workload manager?  Since I'm a newbie in Linux administration there are many things that are not clear from the Galaxy project website; I feel some steps are omitted, or I'm not getting a clear p ...
cluster drmaa-python slurm written 2.2 years ago by clijeron10
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Answer: A: IOError: [Errno 13] Permission denied: compiled_templates/grid_base.mako.py
... Thanks for the feedback John / Dannon !! After my posting a colleague was able to modify the permissions on the directory in a way that users within the Galaxy system could read the datasets and also the user who starts the Galaxy instance could have read/write access.   So, this worked out well an ...
written 3.2 years ago by clijeron10
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IOError: [Errno 13] Permission denied: compiled_templates/grid_base.mako.py
... Hello everyone, My name is Carlos and I'm currently working for the City University of New York implementing Galaxy for biomedical research.   I'm new to Galaxy and even Linux world, so please be patient. After properly installing Galaxy and making the basic changes to the universe_wsgi.ini file, ...
galaxy error written 3.2 years ago by clijeron10

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Popular Question 2.2 years ago, created a question with more than 1,000 views. For IOError: [Errno 13] Permission denied: compiled_templates/grid_base.mako.py

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